PASCAL - Pattern Analysis, Statistical Modelling and Computational Learning

EPrints submitted by Karsten Borgwardt

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Number of EPrints submitted by this user: 10

A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series
Oliver Stegle, Katherine Denby, Zoubin Ghahramani, David Wild and Karsten Borgwardt
RECOMB 2009 2008.

A kernel method for unsupervised structured network inference
Christoph Lippert, Oliver Stegle, Zoubin Ghahramani and Karsten Borgwardt
AISTATS 2009 2008.

Efficient Graphlet Kernels for Large Graph Comparison
Nino Shervashidze, S V N Vishwanathan, Tobias Petri, Kurt Mehlhorn and Karsten Borgwardt
AISTATS 2009 2008.

Near-optimal supervised feature selection among frequent subgraphs
Marisa Thoma, Hong Cheng, Arthur Gretton, Jiawei Han, Hans-Peter Kriegel, Alex Smola, Le Song, Philip Yu, Xifeng Yan and Karsten Borgwardt
SIAM Data Mining (SDM) 2009 2008.

EPIBLASTER-Fast exhaustive two-locus epistasis detection strategy using graphical processing units
Tony Kam-Thong, Darina Czamara, Koji Tsuda, Karsten Borgwardt, Cathryn M. Lewis, Angelika Erhardt-Lehmann, Bernhard Hemmer, Peter Rieckmann, Markus Daake, Frank Weber, Christiane Wolf, Andreas Ziegler, Benno Pütz, Florian Holsboer, Bernhard Schölkopf and Bertram Müller-Myhsok
European Journal of Human Genetics Volume 19, pp. 465-471, 2011.

Graph Kernels
SVN Vishwanathan, Nicol N. Schraudolph, Risi Kondor and Karsten Borgwardt
Journal of Machine Learning Research Number 11, pp. 1201-1242, 2010.

Discriminative frequent subgraph mining with optimality guarantees
Marisa Thoma, Hong Cheng, Arthur Gretton, Jiawei Han, Hans-Peter Kriegel, Alexander J. Smola, Le Song, Philip S. Yu, Xifeng Yan and Karsten Borgwardt
Journal of Statistical Analysis and Data Mining Volume 3, Number 5, pp. 302-318, 2010.

Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs
Tony Kam-Thong, Benno Puetz, Nazanin Karbalai, Bertram Müller-Myhsok and Karsten Borgwardt
Bioinformatics Volume 27, Number 13, i214-i221, 2011.

Two-locus association mapping in subquadratic runtime
Panagiotis Achlioptas, Bernhard Schölkopf and Karsten Borgwardt
Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining pp. 726-734, 2011.

Feature Selection via Dependence Maximization
Le Song, Alex Smola, Arthur Gretton, Justin Bedo and Karsten Borgwardt
Journal of Machine Learning Research Volume 13, pp. 1393-1434, 2012.