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Pruning nearest neighbor cluster trees. AbstractNearest neighbor (k-NN) graphs are widely used in machine learning and data mining applica- tions, and our aim is to better understand what they reveal about the cluster structure of the un- known underlying distribution of points. More- over, is it possible to identify spurious structures that might arise due to sampling variability? Our first contribution is a statistical analysis that reveals how certain subgraphs of a k-NN graph form a consistent estimator of the cluster tree of the underlying distribution of points. Our sec- ond and perhaps most important contribution is the following finite sample guarantee. We care- fully work out the tradeoff between aggressive and conservative pruning and are able to guar- antee the removal of all spurious cluster struc- tures at all levels of the tree while at the same time guaranteeing the recovery of salient clus- ters. This is the first such finite sample result in the context of clustering.
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