PASCAL - Pattern Analysis, Statistical Modelling and Computational Learning

On representation of DNA by line distance matrix
Tomaž Pisanski, Jure Zupan and Milan Randić
J. math. chem. Volume 43, Number 2, pp. 674-692, 2008. ISSN 0259-9791

Abstract

Recently Line Distance (LD) matrix has been introduced as a novel route for characterization of DNA sequences. The approach was based on construction of four separate submatrices for the four nucleotides, the first row of each of which records the separation between the selected nucleotide and the remaining nucleotides of the same kind. In this article, we consider an alternative representation of DNA by LD matrix in which we construct a single matrix for each DNA sequence. The approach is illustrated on the DNA sequence of the first exon of human β-globin gene.

EPrint Type:Article
Project Keyword:Project Keyword UNSPECIFIED
Subjects:Theory & Algorithms
ID Code:8264
Deposited By:Boris Horvat
Deposited On:21 February 2012